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- (hist) MSL Objects:CoiledCoils [365 bytes]
- (hist) MSL Objects:HelixFusion [365 bytes]
- (hist) MSL Objects:Interaction [365 bytes]
- (hist) MSL Objects:CharmmEnergy [369 bytes]
- (hist) MSL Objects:GSLMinimizer [369 bytes]
- (hist) MSL Objects:OptionParser [369 bytes]
- (hist) MSL Objects:PDBFragments [369 bytes]
- (hist) MSL Objects:PhiPsiReader [369 bytes]
- (hist) MSL Objects:AtomSelection [373 bytes]
- (hist) MSL Objects:ChiStatistics [373 bytes]
- (hist) MSL Objects:LogicalParser [373 bytes]
- (hist) MSL Objects:SurfaceSphere [373 bytes]
- (hist) Download [375 bytes]
- (hist) MSL Objects:CartesianPoint [377 bytes]
- (hist) MSL Objects:BBQTableReader [377 bytes]
- (hist) MSL Objects:BBQTableWriter [377 bytes]
- (hist) MSL Objects:CrystalLattice [377 bytes]
- (hist) MSL Objects:HelixGenerator [377 bytes]
- (hist) MSL Objects:PotentialTable [377 bytes]
- (hist) MSL Objects:RotamerLibrary [377 bytes]
- (hist) MSL Objects:SasaCalculator [377 bytes]
- (hist) MSL Objects:SphericalPoint [377 bytes]
- (hist) MSL Objects:AtomBondBuilder [381 bytes]
- (hist) MSL Objects:PolymerSequence [381 bytes]
- (hist) MSL Objects:SelfPairManager [381 bytes]
- (hist) MSL Objects:PhiPsiStatistics [385 bytes]
- (hist) MSL Objects:ResiduePairTable [385 bytes]
- (hist) MSL Objects:ResidueSelection [385 bytes]
- (hist) MSL Objects:System [389 bytes]
- (hist) MSL Objects:AtomPointerVector [389 bytes]
- (hist) MSL Objects:CartesianGeometry [389 bytes]
- (hist) MSL Objects:EnergeticAnalysis [389 bytes]
- (hist) MSL Objects:UserDefinedEnergy [389 bytes]
- (hist) MSL Objects:DeadEndElimination [393 bytes]
- (hist) MSL Objects:PyMolVisualization [393 bytes]
- (hist) MSL Objects:RandomSeqGenerator [393 bytes]
- (hist) MSL Objects:TwoBodyInteraction [393 bytes]
- (hist) MSL Objects:OneBodyInteraction [393 bytes]
- (hist) MSL Objects:EnvironmentDatabase [397 bytes]
- (hist) MSL Objects:FourBodyInteraction [397 bytes]
- (hist) MSL Objects:SystemRotamerLoader [397 bytes]
- (hist) MSL Objects:AtomicPairwiseEnergy [401 bytes]
- (hist) MSL Objects:CharmmTopologyReader [401 bytes]
- (hist) MSL Objects:CharmmVdwInteraction [401 bytes]
- (hist) MSL Objects:RotamerLibraryReader [401 bytes]
- (hist) MSL Objects:RotamerLibraryWriter [401 bytes]
- (hist) MSL Objects:SurfaceAreaAndVolume [401 bytes]
- (hist) MSL Objects:ThreeBodyInteraction [401 bytes]
- (hist) MSL Objects:HBond LJGaussianInteraction [403 bytes]
- (hist) MSL Objects:AtomAngleRelationship [405 bytes]
- (hist) MSL Objects:CharmmBondInteraction [405 bytes]
- (hist) MSL Objects:CharmmParameterReader [405 bytes]
- (hist) MSL Objects:CharmmTopologyResidue [405 bytes]
- (hist) MSL Objects:EnvironmentDescriptor [405 bytes]
- (hist) MSL Objects:RandomNumberGenerator [405 bytes]
- (hist) MSL Objects:RotamerLibraryBuilder [405 bytes]
- (hist) MSL Objects:CharmmEEF1Interaction [405 bytes]
- (hist) MSL Objects:CharmmAngleInteraction [409 bytes]
- (hist) MSL Objects:MonteCarloOptimization [409 bytes]
- (hist) MSL Objects:ResiduePairTableReader [409 bytes]
- (hist) MSL Objects:UserDefinedInteraction [409 bytes]
- (hist) MSL Objects:PDBWriter [415 bytes]
- (hist) MSL Objects:AtomDihedralRelationship [417 bytes]
- (hist) MSL Objects:AtomDistanceRelationship [417 bytes]
- (hist) MSL Objects:PairwiseEnergyCalculator [417 bytes]
- (hist) MSL Objects:ResidueSubstitutionTable [417 bytes]
- (hist) MSL Objects:CharmmEEF1RefInteraction [417 bytes]
- (hist) MSL Objects:AtomGeometricRelationship [421 bytes]
- (hist) MSL Objects:CharmmDihedralInteraction [421 bytes]
- (hist) MSL Objects:CharmmImproperInteraction [421 bytes]
- (hist) MSL Objects:MoleculeInterfaceDatabase [421 bytes]
- (hist) MSL Objects:CharmmEEF1ParameterReader [421 bytes]
- (hist) MSL Objects:InterfaceResidueDescriptor [425 bytes]
- (hist) MSL Objects:PrincipleComponentAnalysis [425 bytes]
- (hist) MSL Objects:UserDefinedEnergySetBuilder [429 bytes]
- (hist) MSL Objects:CharmmUreyBradleyInteraction [433 bytes]
- (hist) MSL Objects:LinearProgrammingOptimization [437 bytes]
- (hist) MSL Objects:CharmmElectrostaticInteraction [441 bytes]
- (hist) MSL Objects:ResidueSubstitutionTableReader [441 bytes]
- (hist) MSL Objects:CharmmSystemBuilder [455 bytes]
- (hist) MSL Objects:TwoBodyDistanceDependentPotentialTable [473 bytes]
- (hist) MSL Objects:EnergySet [509 bytes]
- (hist) Tutorial: Download CHARMM topology and parameter files [540 bytes]
- (hist) MSL by example:Regular Expressions [567 bytes]
- (hist) MSL Programs [631 bytes]
- (hist) Documentation [677 bytes]
- (hist) Tutorial:Check in procedure [685 bytes]
- (hist) ToDo [867 bytes]
- (hist) PyMOL Python Interface [882 bytes]
- (hist) MSL Programs:getSelection [981 bytes]
- (hist) Committing code to MSL [1,505 bytes]
- (hist) Tutorial:Getting started: Compiling MSL [1,557 bytes]
- (hist) MSL Programs:getSurroundingResidues [1,728 bytes]
- (hist) Tutorial:Getting started: Compiling your own programs in MSL [1,872 bytes]
- (hist) Tutorial::Mutating Residues [2,576 bytes]
- (hist) Tutorial:Getting started: Downloading MSL [2,615 bytes]
- (hist) Tutorial:Using regular expression: Selecting sequence motifs of a Chain [2,743 bytes]
- (hist) Tutorial::CoiledCoils Bundles [2,920 bytes]
- (hist) Tutorial:Selecting subsets of atoms [3,173 bytes]
- (hist) MSL Programs:getDihedrals [3,203 bytes]
- (hist) Tutorial [3,276 bytes]
- (hist) Tutorial:Measuring distances, angles, dihedrals [3,332 bytes]
- (hist) Tutorial:Reading a PDB file with the simpler molecular object: the AtomContainer [3,398 bytes]
- (hist) Main Page [3,453 bytes]
- (hist) Tutorial:OptionParser [3,799 bytes]
- (hist) MSL Objects:AtomContainer [3,900 bytes]
- (hist) Tutorial:Reading a PDB file with the complex molecular object: the System [3,968 bytes]
- (hist) MSL Programs::repackSideChains [3,981 bytes]
- (hist) Tutorial:Molecular alignments [4,106 bytes]
- (hist) Google Summer of Code Ideas [6,790 bytes]
- (hist) Tutorial:Molecular Object Getters [6,970 bytes]
- (hist) Tutorial:Passing atoms between objects: the AtomPointerVector [8,136 bytes]
- (hist) Tutorial:Looping over Chains, Residues, Atoms in the System [8,400 bytes]
- (hist) MSL Objects [8,549 bytes]
- (hist) Tutorial:Getting started: Compiling MSL with external libraries [9,092 bytes]