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• 22:25, 31 March 2010 (diff | hist) (+49)‎ Tutorial:Using regular expression: Selecting sequence motifs of a Chain ‎
• 22:24, 31 March 2010 (diff | hist) (-49)‎ Tutorial:Using regular expression: Selecting sequence motifs of a Chain ‎
• 22:23, 31 March 2010 (diff | hist) (+1,002)‎ N Tutorial:Using regular expression: Selecting sequence motifs of a Chain ‎ (Created page with 'This is an example on how to select sequence motifs from '''Chain]''' objects. A '''[[MSL Objects:Chain|Chain object''' versus a '''[[MSL Objects:System|Sy…')
• 21:44, 31 March 2010 (diff | hist) (+78)‎ Tutorial ‎
• 19:32, 31 March 2010 (diff | hist) (+18)‎ MSL Programs ‎
• 17:05, 31 March 2010 (diff | hist) (+465)‎ MSL Programs:getDihedrals ‎ (→‎Options) (current)
• 17:04, 31 March 2010 (diff | hist) (+3)‎ MSL Programs:getDihedrals ‎ (→‎Examples)
• 16:57, 31 March 2010 (diff | hist) (+1,083)‎ MSL Programs:getDihedrals ‎ (→‎Examples)
• 16:44, 31 March 2010 (diff | hist) (+111)‎ MSL Programs:getDihedrals ‎
• 16:41, 31 March 2010 (diff | hist) (-1)‎ MSL Programs:getDihedrals ‎ (→‎Options)
• 16:40, 31 March 2010 (diff | hist) (+1,542)‎ N MSL Programs:getDihedrals ‎ (Created page with '==getDihedrals== A program to print out the dihedral angles of an input structure. Prints out backbone angles (phi/psi) and side chain angles (chi1-4). Optionally, will analyz…')
• 16:34, 31 March 2010 (diff | hist) (+155)‎ MSL Programs ‎
• 22:02, 23 March 2010 (diff | hist) (+2)‎ Tutorial:Selecting subsets of atoms ‎ (→‎Background) (current)
• 22:02, 23 March 2010 (diff | hist) (+35)‎ Tutorial:Selecting subsets of atoms ‎
• 22:01, 23 March 2010 (diff | hist) (-1,373)‎ Tutorial:Selecting subsets of atoms ‎ (→‎Program description)
• 21:24, 23 March 2010 (diff | hist) (-552)‎ Tutorial:Selecting subsets of atoms ‎ (→‎Program description)
• 21:22, 23 March 2010 (diff | hist) (+3,055)‎ Tutorial:Selecting subsets of atoms ‎ (→‎Program description)
• 21:07, 23 March 2010 (diff | hist) (+66)‎ Tutorial ‎
• 20:53, 23 March 2010 (diff | hist) (+91)‎ Tutorial:Selecting subsets of atoms ‎
• 20:52, 23 March 2010 (diff | hist) (-22)‎ Tutorial:Selecting subsets of atoms ‎ (→‎Selection By Name:)
• 20:51, 23 March 2010 (diff | hist) (+319)‎ Tutorial:Selecting subsets of atoms ‎
• 20:47, 23 March 2010 (diff | hist) (-4,944)‎ Tutorial:Selecting subsets of atoms ‎
• 20:16, 23 March 2010 (diff | hist) (+6,562)‎ N Tutorial:Selecting subsets of atoms ‎ (Created page with '<font color="red">NOTE: TUTORIAL WRITING IN PROGRESS DO NOT FOLLOW THIS</font> This is an example on how to select atoms and residues with MSL, following the example program ex…')
• 20:11, 23 March 2010 (diff | hist) (+110)‎ Tutorial ‎
• 23:13, 12 March 2010 (diff | hist) (+31)‎ Tutorial ‎
• 13:48, 11 March 2010 (diff | hist) (+20)‎ Tutorial ‎
• 13:46, 11 March 2010 (diff | hist) (+123)‎ Tutorial ‎
• 16:23, 4 March 2010 (diff | hist) (+210)‎ MSL Programs:getSurroundingResidues ‎ (→‎getSurroundingResidues) (current)
• 15:03, 4 March 2010 (diff | hist) (+32)‎ MSL Programs:getSurroundingResidues ‎ (→‎getSurroundingResidues)
• 15:02, 4 March 2010 (diff | hist) (-48)‎ MSL Programs:getSurroundingResidues ‎ (→‎Options)
• 15:01, 4 March 2010 (diff | hist) (+6)‎ MSL Programs:getSurroundingResidues ‎ (→‎Options)
• 15:01, 4 March 2010 (diff | hist) (+1,528)‎ N MSL Programs:getSurroundingResidues ‎ (Created page with '==getSurroundingResidues== A program to select all the residues around a given atom type from a database of pdb files. ==Options== --pdblist List of pro…')
• 14:53, 4 March 2010 (diff | hist) (+64)‎ MSL Programs ‎
• 04:55, 26 February 2010 (diff | hist) (+3)‎ MSL Programs:getSelection ‎ (current)
• 04:54, 26 February 2010 (diff | hist) (+138)‎ MSL Programs:getSelection ‎
• 19:58, 18 February 2010 (diff | hist) (-17)‎ Main Page ‎ (→‎Reference)
• 19:57, 18 February 2010 (diff | hist) (+80)‎ Main Page ‎ (→‎Reference)
• 16:43, 17 February 2010 (diff | hist) (+14)‎ PyMOL Python Interface ‎ (→‎Install PythonMSL plugin)
• 16:42, 17 February 2010 (diff | hist) (+130)‎ PyMOL Python Interface ‎ (→‎Install PythonMSL plugin)
• 16:39, 17 February 2010 (diff | hist) (+16)‎ Main Page ‎ (→‎Documentation)
• 16:28, 17 February 2010 (diff | hist) (+258)‎ PyMOL Python Interface ‎
• 16:26, 17 February 2010 (diff | hist) (+478)‎ N PyMOL Python Interface ‎ (Created page with '== Install PythonMSL plugin == #Install PyMOL by going here: http://www.pymol.org/ #First you need to make the PythonMSL.so library ( Pre-compiled libraries should be available i…')
• 16:21, 17 February 2010 (diff | hist) (+93)‎ Main Page ‎ (→‎Documentation)
• 16:35, 16 February 2010 (diff | hist) (+5)‎ MSL Programs:getSelection ‎ (→‎Options)
• 15:51, 16 February 2010 (diff | hist) (+2)‎ MSL by example ‎
• 15:51, 16 February 2010 (diff | hist) (+543)‎ N MSL by example ‎ (Created page with '== Regular Expressions == // Generic string matching string regExpression = "^CLUSTAL W (\\S+)\\s+([\\S\\s]+)$"; string lineToMatch="CLUSTAL W 2.1 multiple sequence alignment…')
• 05:48, 16 February 2010 (diff | hist) (-3)‎ Main Page ‎ (→‎Distributed Programs)
• 05:48, 16 February 2010 (diff | hist) (+159)‎ N GetSelections ‎ (Created page with '==getSelection== A simple program to take a protein structure file and execute MSL selections (very similar in structure to PyMOL selections). ==Examples==') (current)
• 05:44, 16 February 2010 (diff | hist) (+49)‎ Main Page ‎
• 04:31, 16 February 2010 (diff | hist) (0)‎ Main Page ‎

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