Difference between revisions of "Tutorial:Using regular expression: Selecting sequence motifs of a Chain"
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| − | This is an example on how to select sequence motifs from '''[[MSL Objects:Chain|Chain]''' objects. A '''[[MSL Objects:Chain|Chain object]]''' versus a '''[[MSL Objects:System|System object]]''' is used because regular expressions can not span across chains. | + | This is an example on how to select sequence motifs from '''[[MSL Objects:Chain|Chain]]''' objects. A '''[[MSL Objects:Chain|Chain object]]''' versus a '''[[MSL Objects:System|System object]]''' is used because regular expressions can not span across chains. |
| − | + | <font color="red"> This tutorial is in progress, there may be errors.</font> | |
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[http://mslib.svn.sourceforge.net/viewvc/mslib/trunk/examples/example_regular_expressions.cpp?view=markup Complete source of example_regular_expressions.cpp] | [http://mslib.svn.sourceforge.net/viewvc/mslib/trunk/examples/example_regular_expressions.cpp?view=markup Complete source of example_regular_expressions.cpp] | ||
Revision as of 22:24, 31 March 2010
This is an example on how to select sequence motifs from Chain objects. A Chain object versus a System object is used because regular expressions can not span across chains.
This tutorial is in progress, there may be errors.
Complete source of example_regular_expressions.cpp
To compile
% make bin/example_regular_expresssionsTo run the program
Go to the main directory and run the command (note, the location of the exampleFiles subdirectory needs to be provided as an argument)
% bin/example_regularExpressions exampleFiles/example0004.pdb