Difference between revisions of "MSL Programs"
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* [[MSL_Programs:getSurroundingResidues|getSurroundingResidues]] | * [[MSL_Programs:getSurroundingResidues|getSurroundingResidues]] | ||
* [[MSL_Programs:getDihedrals|getDihedrals]] a program to get phi/psi and chi angles of a given structure. Can also give you probabilities and propensities for each angle. | * [[MSL_Programs:getDihedrals|getDihedrals]] a program to get phi/psi and chi angles of a given structure. Can also give you probabilities and propensities for each angle. | ||
| − | * [[MSL_Programs::repackSideChains|repackSideChains]] a program to repack and/or design | + | * [[MSL_Programs::repackSideChains|repackSideChains]] a program to repack sidechains |
| + | * [[MSL_Programs::energyTable|energyTable]] a program to generate an energy table for repacking and/or designing sidechains | ||
| + | * [[MSL_Programs::optimizeMC|optimizeMC]] a program to optimize an energy table (selects minimum energy side chains for repack/design runs) | ||
Latest revision as of 18:39, 28 November 2011
- getSelection
- getSurroundingResidues
- getDihedrals a program to get phi/psi and chi angles of a given structure. Can also give you probabilities and propensities for each angle.
- repackSideChains a program to repack sidechains
- energyTable a program to generate an energy table for repacking and/or designing sidechains
- optimizeMC a program to optimize an energy table (selects minimum energy side chains for repack/design runs)
