Difference between revisions of "Tutorial:Getting started: Downloading MSL"
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MSL is available from SourceForge, at [https://sourceforge.net/projects/mslib/ the project page] (stable releases) and at the [http://mslib.svn.sourceforge.net/ SVN repository] (stable, betas, development version). | MSL is available from SourceForge, at [https://sourceforge.net/projects/mslib/ the project page] (stable releases) and at the [http://mslib.svn.sourceforge.net/ SVN repository] (stable, betas, development version). | ||
| − | ''' | + | ==== Version 1.1 released (04/03/2013) ==== |
| + | '''New Features''' | ||
| + | * Added IMM1 solvation model | ||
| + | * Added a facility to temporarily hide identities (amini acid types) at positions that contain more than one identity | ||
| + | * Initial implementation of clustering algorithms (SingleLinkage, Average-Linkage, Complete-Linkage and PAM/Kmedoids) in src/Clustering.h | ||
| + | * Object for fitting a coiled coil to parameters, in src/CoiledCoilFitter.h | ||
| − | * '''v.1.0 (v.1.0.0.9), stable release''' | + | '''Bug fixes''' |
| + | * Fixed bug with linked position during on-the-fly energy computation | ||
| + | * Fixed bugs in the implementation of SCWRL4 hydrogen bond | ||
| + | |||
| + | ====Download links==== | ||
| + | * '''v.1.1 (v.1.1.0.0), stable release''' | ||
| + | ** Download a tar ball (.tgz file) from the SourceForge MSL page '''[http://sourceforge.net/projects/mslib/files/v.1.1/mslib-1.1.0.0.tgz http://sourceforge.net/projects/mslib/files/v.1.1/mslib-1.1.0.0.tgz]''' | ||
| + | ** ...or check out the v.1.1 branch using Subversion (svn) with the following command | ||
| + | <source lang="text"> | ||
| + | svn co https://mslib.svn.sourceforge.net/svnroot/mslib/branches/v.1.1 | ||
| + | </source> | ||
| + | |||
| + | * '''v.1.0 (v.1.0.0.9), old stable release''' | ||
** Download a tar ball (.tgz file) from the SourceForge MSL page '''[http://sourceforge.net/projects/mslib/files/v.1.0/mslib-1.0.0.9.tgz http://sourceforge.net/projects/mslib/files/v.1.0/mslib-1.0.0.9.tgz]''' | ** Download a tar ball (.tgz file) from the SourceForge MSL page '''[http://sourceforge.net/projects/mslib/files/v.1.0/mslib-1.0.0.9.tgz http://sourceforge.net/projects/mslib/files/v.1.0/mslib-1.0.0.9.tgz]''' | ||
** ...or check out the v.1.0 branch using Subversion (svn) with the following command | ** ...or check out the v.1.0 branch using Subversion (svn) with the following command | ||
<source lang="text"> | <source lang="text"> | ||
svn co https://mslib.svn.sourceforge.net/svnroot/mslib/branches/v.1.0 | svn co https://mslib.svn.sourceforge.net/svnroot/mslib/branches/v.1.0 | ||
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</source> | </source> | ||
Revision as of 01:47, 4 April 2013
MSL is open source software distributed under the terms of the GNU Lesser General Public.
MSL is available from SourceForge, at the project page (stable releases) and at the SVN repository (stable, betas, development version).
Version 1.1 released (04/03/2013)
New Features
- Added IMM1 solvation model
- Added a facility to temporarily hide identities (amini acid types) at positions that contain more than one identity
- Initial implementation of clustering algorithms (SingleLinkage, Average-Linkage, Complete-Linkage and PAM/Kmedoids) in src/Clustering.h
- Object for fitting a coiled coil to parameters, in src/CoiledCoilFitter.h
Bug fixes
- Fixed bug with linked position during on-the-fly energy computation
- Fixed bugs in the implementation of SCWRL4 hydrogen bond
Download links
- v.1.1 (v.1.1.0.0), stable release
- Download a tar ball (.tgz file) from the SourceForge MSL page http://sourceforge.net/projects/mslib/files/v.1.1/mslib-1.1.0.0.tgz
- ...or check out the v.1.1 branch using Subversion (svn) with the following command
svn co https://mslib.svn.sourceforge.net/svnroot/mslib/branches/v.1.1- v.1.0 (v.1.0.0.9), old stable release
- Download a tar ball (.tgz file) from the SourceForge MSL page http://sourceforge.net/projects/mslib/files/v.1.0/mslib-1.0.0.9.tgz
- ...or check out the v.1.0 branch using Subversion (svn) with the following command
svn co https://mslib.svn.sourceforge.net/svnroot/mslib/branches/v.1.0- Development version (trunk)
- Download a tar ball (.tgz file) from the SourceForge SVN repository http://mslib.svn.sourceforge.net/viewvc/mslib/trunk/?view=tar
- ... or check out the trunk using Subversion (snv) with the following command
svn co https://mslib.svn.sourceforge.net/svnroot/mslib/trunkFor compiling instructions refer to the Tutorial page.
NOTE: by default, MSL assumes that you have installed GSL. We highly recommend that you install GSL prior to MSL compilation.
